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documentation [2016/07/28 12:25]
coligny
documentation [2016/08/22 14:48] (current)
Seb [Technical documentation]
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 +====== AMAPstudio documentation ======
 +
 +AMAPstudio is a software suite for plants architecture modelling. It contains applications and models to rebuild, explore, analyse and study the growth of plants from an architectural point of view.
 +
 +===== General documentations =====
 +
 +  * [[whoCanJoinAMAPstudio|Who can join the AMAPstudio project ?]]
 +
 +===== Documentation for the AMAPstudio modellers =====
 +
 +  * [[http://​amap-dev.cirad.fr/​projects/​jeeb|The Redmine project manager for AMAPstudio]]
 +  * [[howToInstallTheSVNAMAPstudioVersionForTheModellers|How to install the SVN-AMAPstudio version for the modellers]]
 +  * [[private:​howToCompileAMAPstudio|How to compile AMAPstudio ?]]
 +  * [[private:​howToBuildAnAMAPstudioInstaller|How to build an AMAPstudio installer for your partners with only your module ?]]
 +
 +
 +===== Software documentations =====
 +
 +  * The documentation for Xplo is [[soft:​xplo:​documentation|here]].
 +  * The documentation for Simeo is [[soft:​simeo:​documentation|here]].
 +  * The installation documentation can be found on the [[download|download page]].
 +
 +===== Presentations =====
 +
 +  * Capsis / AMAPstudio, an integrative approach for forests and plants architecture modelling. "​Modelling of ecosystems by tools from computer sciences",​ international summer school in Prague (Czech Republic), 16-20 September, 2013 - {{:​capsis-amapstudio-integrative-approach-v2.pdf|.pdf}} - {{:​capsis-amapstudio-integrative-approach-v2.odp|.odp}}
 +  * {{:​amapstudio_presentation.pdf|AMAPstudio:​ A Software Suite for Plants Architecture Modelling}},​ by S. Griffon at PMA'​12:​ 2012 IEEE Fourth International Symposium on Plant Growth, Modeling, Simulation, Vizualization and Applications,​ Shanghai, China 2012
 +  * A {{:​sg-bresil-oct2011-amapstudio.pdf|presentation of AMAPstudio}} at the first French-Brazilian FSPM meeting (26.10.2011)
 +  * Plant architecture {{:​sg-measure_softwate_26_10_11.pdf|acquisition and edition software}} (26.10.2011)
 +
 +===== Training =====
 +  * [[formation:​MESP|MESP training]] (Mesure et Exploration de la Structure des Plantes / Measurement and Exploration of Structure of Plants) (2-3 april 2015).
 +
 +
 +
 +===== Technical documentation =====
 +
 +Developpers and modellers of the AMAPstudio co-development community may be interested by the following technical topics.
 +
 +  * [[private:​EncodingErrorDuringSVNUpdate|SVN checkout notifies an encoding problem (svn: Can't convert string from '​UTF-8'​ to native encoding)]]
 +  * [[private:​LinkToPublicDropBoxFiles|Make links from the wiki to data files in DropBox]]
 +  * [[private:​AmapServersAndDokuwikiUpgrade|Technical memo: Amap servers and Dokuwiki upgrade]]
 +  * [[private:​MacOSXandJDK1.7|Upgrade Java to JDK 1.8 under Mac OS X]]
 +  * [[private:​UpgradeToSmartSVN8|Upgrade to SmartSVN 8 needed to reconnect to the SVN server after an SSL upgrade (18.4.2014)]]
 +  * [[private:​SmartSVNCrashUnderUbuntu13.10|SmartSVN crashes at start time under Ubuntu 13.10]]
 +  * [[private:​HowToUseTheMBBCluster|How to use the MBB cluster (Labex Cemeb members only, including AMAP members)]]  ​
 +  * [[private:​CenteredOPFmanagement|New management of position and rotations in OPF files]]  ​
 +  * [[private:​FileReader|How to use the FileReader to read complex text files]]
 +  * [[private:​SmartSVNupdate500InternalErrorIssue|Update in SmartSVN fails with '500 Internal Server Error'​]]
 +  * {{:​java-training.pdf|An introduction to the Java language}} (copied from the [[http://​www.inra.fr/​capsis|Capsis web site]]).
 +  * [[private:​encodingIssues|Encoding issues]]
 +  * [[private:​installEclipseWithSVN|Install Eclipse with SVN +++]]
 +  * **[[private:​installMATinEcWithSVNlipse|Install MAT in Eclipse to browse memory usage (fr)]]**
 +  * [[private:​aToolToClassifyEasily|A tool to classify easily]]
 +  * **{{:​tutoriel_ubuntu_eclipse_java.pdf|Tutorial to install ubuntu, the JDK and eclipse (fr)}}**  ​
 +  * [[private:​technicalNotes|Technical notes (for developers)]]
 +